PoplarV1, Main, Exploration, bibRecord, 000F57

Distinct Communities of Poplar Endophytes on an Unpolluted and a Risk Element-Polluted Site and Their Plant Growth-Promoting Potential In Vitro.

Identifieur interne : 000F57 ( Main/Exploration ); précédent : 000F56; suivant : 000F58

Distinct Communities of Poplar Endophytes on an Unpolluted and a Risk Element-Polluted Site and Their Plant Growth-Promoting Potential In Vitro.

Auteurs : C S Schmidt [République tchèque] ; P. Lovecká [République tchèque] ; L. Mrnka [République tchèque] ; A. Vychodilová [République tchèque] ; M. Strej Ek [République tchèque] ; M. Fenclová [République tchèque] ; K. Demnerová [République tchèque]

Source :

Microbial ecology [ 1432-184X ] ; 2018.

RBID : pubmed:29127500

Descripteurs français

KwdFr :
- Antioxydants (métabolisme), Bactéries (classification), Bactéries (effets des médicaments et des substances chimiques), Bactéries (isolement et purification), Bactéries (métabolisme), Biodiversité (MeSH), Biomasse (MeSH), Carbon-carbon lyases (métabolisme), Champignons (classification), Champignons (effets des médicaments et des substances chimiques), Champignons (isolement et purification), Champignons (métabolisme), Dépollution biologique de l'environnement (MeSH), Développement des plantes (MeSH), Endophytes (classification), Endophytes (effets des médicaments et des substances chimiques), Endophytes (isolement et purification), Endophytes (métabolisme), Facteur de croissance végétal (métabolisme), Feuilles de plante (microbiologie), Microbiologie du sol (MeSH), Microbiote (effets des médicaments et des substances chimiques), Microbiote (physiologie), Phosphates (métabolisme), Phylogenèse (MeSH), Polluants environnementaux (toxicité), Populus (microbiologie), Racines de plante (microbiologie), République tchèque (MeSH), Sidérophores (métabolisme), Sol (composition chimique), Techniques in vitro (MeSH), Tolérance aux médicaments (MeSH).
MESH :
- composition chimique : Bactéries, Champignons, Endophytes, Sol.
- effets des médicaments et des substances chimiques : Bactéries, Champignons, Endophytes, Microbiote.
- isolement et purification : Bactéries, Champignons, Endophytes.
- microbiologie : Feuilles de plante, Populus, Racines de plante.
- métabolisme : Antioxydants, Bactéries, Carbon-carbon lyases, Champignons, Endophytes, Facteur de croissance végétal, Phosphates, Sidérophores.
- physiologie : Microbiote.
- toxicité : Polluants environnementaux.
- Biodiversité, Biomasse, Dépollution biologique de l'environnement, Développement des plantes, Microbiologie du sol, Phylogenèse, République tchèque, Techniques in vitro, Tolérance aux médicaments.
Wicri :
- geographic : République tchèque.

English descriptors

KwdEn :
- Antioxidants (metabolism), Bacteria (classification), Bacteria (drug effects), Bacteria (isolation & purification), Bacteria (metabolism), Biodegradation, Environmental (MeSH), Biodiversity (MeSH), Biomass (MeSH), Carbon-Carbon Lyases (metabolism), Czech Republic (MeSH), Drug Tolerance (MeSH), Endophytes (classification), Endophytes (drug effects), Endophytes (isolation & purification), Endophytes (metabolism), Environmental Pollutants (toxicity), Fungi (classification), Fungi (drug effects), Fungi (isolation & purification), Fungi (metabolism), In Vitro Techniques (MeSH), Microbiota (drug effects), Microbiota (physiology), Phosphates (metabolism), Phylogeny (MeSH), Plant Development (MeSH), Plant Growth Regulators (metabolism), Plant Leaves (microbiology), Plant Roots (microbiology), Populus (microbiology), Siderophores (metabolism), Soil (chemistry), Soil Microbiology (MeSH).
MESH :
- chemical , chemistry : Soil.
- chemical , metabolism : Antioxidants, Carbon-Carbon Lyases, Phosphates, Plant Growth Regulators, Siderophores.
- chemical , toxicity : Environmental Pollutants.
- geographic : Czech Republic.
- classification : Bacteria, Endophytes, Fungi.
- drug effects : Bacteria, Endophytes, Fungi, Microbiota.
- isolation & purification : Bacteria, Endophytes, Fungi.
- metabolism : Bacteria, Endophytes, Fungi.
- microbiology : Plant Leaves, Plant Roots, Populus.
- physiology : Microbiota.
- Biodegradation, Environmental, Biodiversity, Biomass, Drug Tolerance, In Vitro Techniques, Phylogeny, Plant Development, Soil Microbiology.

Abstract

Numerous studies demonstrated that endophytic microbes can promote plant growth and increase plant stress resistance. We aimed at isolating poplar endophytes able to increase their hosts' fitness both in nutrient-limited and polluted environments. To achieve this goal, endophytic bacteria and fungi were isolated from roots and leaves of hybrid poplars (Populus nigra × P. maximowiczii clone Max-4) on an unpolluted and a risk element-polluted site in the Czech Republic and subsequently screened by a number of in vitro tests. Bacterial communities at the unpolluted site were dominated by Gammaproteobacteria with Pseudomonas sp. as the prominent member of the class, followed by Bacilli with prevailing Bacillus sp., whereas Alphaproteobacteria, mostly Rhizobium sp., prevailed at the polluted site. The fungal endophytic community was dominated by Ascomycetes and highly distinct on both sites. Dothideomycetes, mostly Cladosporium, prevailed at the non-polluted site while unclassified Sordariomycetous fungi dominated at the polluted site. Species diversity of endophytes was higher at the unpolluted site. Many tested endophytic strains solubilized phosphate and produced siderophores, phytohormones, and antioxidants. Some strains also exhibited ACC-deaminase activity. Selected bacteria showed high tolerance and the ability to accumulate risk elements, making them promising candidates for use in inocula promoting biomass production and phytoremediation. Graphical Abstract ᅟ.

DOI: 10.1007/s00248-017-1103-y
PubMed: 29127500

Affiliations:

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 001088
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Le document en format XML

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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Antioxidants (metabolism)</term>
<term>Bacteria (classification)</term>
<term>Bacteria (drug effects)</term>
<term>Bacteria (isolation & purification)</term>
<term>Bacteria (metabolism)</term>
<term>Biodegradation, Environmental (MeSH)</term>
<term>Biodiversity (MeSH)</term>
<term>Biomass (MeSH)</term>
<term>Carbon-Carbon Lyases (metabolism)</term>
<term>Czech Republic (MeSH)</term>
<term>Drug Tolerance (MeSH)</term>
<term>Endophytes (classification)</term>
<term>Endophytes (drug effects)</term>
<term>Endophytes (isolation & purification)</term>
<term>Endophytes (metabolism)</term>
<term>Environmental Pollutants (toxicity)</term>
<term>Fungi (classification)</term>
<term>Fungi (drug effects)</term>
<term>Fungi (isolation & purification)</term>
<term>Fungi (metabolism)</term>
<term>In Vitro Techniques (MeSH)</term>
<term>Microbiota (drug effects)</term>
<term>Microbiota (physiology)</term>
<term>Phosphates (metabolism)</term>
<term>Phylogeny (MeSH)</term>
<term>Plant Development (MeSH)</term>
<term>Plant Growth Regulators (metabolism)</term>
<term>Plant Leaves (microbiology)</term>
<term>Plant Roots (microbiology)</term>
<term>Populus (microbiology)</term>
<term>Siderophores (metabolism)</term>
<term>Soil (chemistry)</term>
<term>Soil Microbiology (MeSH)</term>
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<keywords scheme="KwdFr" xml:lang="fr"><term>Antioxydants (métabolisme)</term>
<term>Bactéries (classification)</term>
<term>Bactéries (effets des médicaments et des substances chimiques)</term>
<term>Bactéries (isolement et purification)</term>
<term>Bactéries (métabolisme)</term>
<term>Biodiversité (MeSH)</term>
<term>Biomasse (MeSH)</term>
<term>Carbon-carbon lyases (métabolisme)</term>
<term>Champignons (classification)</term>
<term>Champignons (effets des médicaments et des substances chimiques)</term>
<term>Champignons (isolement et purification)</term>
<term>Champignons (métabolisme)</term>
<term>Dépollution biologique de l'environnement (MeSH)</term>
<term>Développement des plantes (MeSH)</term>
<term>Endophytes (classification)</term>
<term>Endophytes (effets des médicaments et des substances chimiques)</term>
<term>Endophytes (isolement et purification)</term>
<term>Endophytes (métabolisme)</term>
<term>Facteur de croissance végétal (métabolisme)</term>
<term>Feuilles de plante (microbiologie)</term>
<term>Microbiologie du sol (MeSH)</term>
<term>Microbiote (effets des médicaments et des substances chimiques)</term>
<term>Microbiote (physiologie)</term>
<term>Phosphates (métabolisme)</term>
<term>Phylogenèse (MeSH)</term>
<term>Polluants environnementaux (toxicité)</term>
<term>Populus (microbiologie)</term>
<term>Racines de plante (microbiologie)</term>
<term>République tchèque (MeSH)</term>
<term>Sidérophores (métabolisme)</term>
<term>Sol (composition chimique)</term>
<term>Techniques in vitro (MeSH)</term>
<term>Tolérance aux médicaments (MeSH)</term>
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<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Soil</term>
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<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Antioxidants</term>
<term>Carbon-Carbon Lyases</term>
<term>Phosphates</term>
<term>Plant Growth Regulators</term>
<term>Siderophores</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="toxicity" xml:lang="en"><term>Environmental Pollutants</term>
</keywords>
<keywords scheme="MESH" type="geographic" xml:lang="en"><term>Czech Republic</term>
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<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Bacteria</term>
<term>Endophytes</term>
<term>Fungi</term>
</keywords>
<keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Bactéries</term>
<term>Champignons</term>
<term>Endophytes</term>
<term>Sol</term>
</keywords>
<keywords scheme="MESH" qualifier="drug effects" xml:lang="en"><term>Bacteria</term>
<term>Endophytes</term>
<term>Fungi</term>
<term>Microbiota</term>
</keywords>
<keywords scheme="MESH" qualifier="effets des médicaments et des substances chimiques" xml:lang="fr"><term>Bactéries</term>
<term>Champignons</term>
<term>Endophytes</term>
<term>Microbiote</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Bacteria</term>
<term>Endophytes</term>
<term>Fungi</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Bactéries</term>
<term>Champignons</term>
<term>Endophytes</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Bacteria</term>
<term>Endophytes</term>
<term>Fungi</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Feuilles de plante</term>
<term>Populus</term>
<term>Racines de plante</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Leaves</term>
<term>Plant Roots</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Antioxydants</term>
<term>Bactéries</term>
<term>Carbon-carbon lyases</term>
<term>Champignons</term>
<term>Endophytes</term>
<term>Facteur de croissance végétal</term>
<term>Phosphates</term>
<term>Sidérophores</term>
</keywords>
<keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Microbiote</term>
</keywords>
<keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Microbiota</term>
</keywords>
<keywords scheme="MESH" qualifier="toxicité" xml:lang="fr"><term>Polluants environnementaux</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Biodegradation, Environmental</term>
<term>Biodiversity</term>
<term>Biomass</term>
<term>Drug Tolerance</term>
<term>In Vitro Techniques</term>
<term>Phylogeny</term>
<term>Plant Development</term>
<term>Soil Microbiology</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Biodiversité</term>
<term>Biomasse</term>
<term>Dépollution biologique de l'environnement</term>
<term>Développement des plantes</term>
<term>Microbiologie du sol</term>
<term>Phylogenèse</term>
<term>République tchèque</term>
<term>Techniques in vitro</term>
<term>Tolérance aux médicaments</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>République tchèque</term>
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<front><div type="abstract" xml:lang="en">Numerous studies demonstrated that endophytic microbes can promote plant growth and increase plant stress resistance. We aimed at isolating poplar endophytes able to increase their hosts' fitness both in nutrient-limited and polluted environments. To achieve this goal, endophytic bacteria and fungi were isolated from roots and leaves of hybrid poplars (Populus nigra × P. maximowiczii clone Max-4) on an unpolluted and a risk element-polluted site in the Czech Republic and subsequently screened by a number of in vitro tests. Bacterial communities at the unpolluted site were dominated by Gammaproteobacteria with Pseudomonas sp. as the prominent member of the class, followed by Bacilli with prevailing Bacillus sp., whereas Alphaproteobacteria, mostly Rhizobium sp., prevailed at the polluted site. The fungal endophytic community was dominated by Ascomycetes and highly distinct on both sites. Dothideomycetes, mostly Cladosporium, prevailed at the non-polluted site while unclassified Sordariomycetous fungi dominated at the polluted site. Species diversity of endophytes was higher at the unpolluted site. Many tested endophytic strains solubilized phosphate and produced siderophores, phytohormones, and antioxidants. Some strains also exhibited ACC-deaminase activity. Selected bacteria showed high tolerance and the ability to accumulate risk elements, making them promising candidates for use in inocula promoting biomass production and phytoremediation. Graphical Abstract ᅟ.</div>
</front>
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<Title>Microbial ecology</Title>
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<ArticleTitle>Distinct Communities of Poplar Endophytes on an Unpolluted and a Risk Element-Polluted Site and Their Plant Growth-Promoting Potential In Vitro.</ArticleTitle>
<Pagination><MedlinePgn>955-969</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1007/s00248-017-1103-y</ELocationID>
<Abstract><AbstractText>Numerous studies demonstrated that endophytic microbes can promote plant growth and increase plant stress resistance. We aimed at isolating poplar endophytes able to increase their hosts' fitness both in nutrient-limited and polluted environments. To achieve this goal, endophytic bacteria and fungi were isolated from roots and leaves of hybrid poplars (Populus nigra × P. maximowiczii clone Max-4) on an unpolluted and a risk element-polluted site in the Czech Republic and subsequently screened by a number of in vitro tests. Bacterial communities at the unpolluted site were dominated by Gammaproteobacteria with Pseudomonas sp. as the prominent member of the class, followed by Bacilli with prevailing Bacillus sp., whereas Alphaproteobacteria, mostly Rhizobium sp., prevailed at the polluted site. The fungal endophytic community was dominated by Ascomycetes and highly distinct on both sites. Dothideomycetes, mostly Cladosporium, prevailed at the non-polluted site while unclassified Sordariomycetous fungi dominated at the polluted site. Species diversity of endophytes was higher at the unpolluted site. Many tested endophytic strains solubilized phosphate and produced siderophores, phytohormones, and antioxidants. Some strains also exhibited ACC-deaminase activity. Selected bacteria showed high tolerance and the ability to accumulate risk elements, making them promising candidates for use in inocula promoting biomass production and phytoremediation. Graphical Abstract ᅟ.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Schmidt</LastName>
<ForeName>C S</ForeName>
<Initials>CS</Initials>
<AffiliationInfo><Affiliation>Institute of Botany ASCR, Zámek 1, 252 43, Průhonice, Czech Republic. Christoph.Schmidt@ibot.cas.cz.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Lovecká</LastName>
<ForeName>P</ForeName>
<Initials>P</Initials>
<AffiliationInfo><Affiliation>University of Chemistry and Technology Prague, Technická 5, 166 28, Praha 6, Czech Republic.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Mrnka</LastName>
<ForeName>L</ForeName>
<Initials>L</Initials>
<AffiliationInfo><Affiliation>Institute of Botany ASCR, Zámek 1, 252 43, Průhonice, Czech Republic.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Vychodilová</LastName>
<ForeName>A</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>University of Chemistry and Technology Prague, Technická 5, 166 28, Praha 6, Czech Republic.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Strejček</LastName>
<ForeName>M</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>University of Chemistry and Technology Prague, Technická 5, 166 28, Praha 6, Czech Republic.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Fenclová</LastName>
<ForeName>M</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>University of Chemistry and Technology Prague, Technická 5, 166 28, Praha 6, Czech Republic.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Demnerová</LastName>
<ForeName>K</ForeName>
<Initials>K</Initials>
<AffiliationInfo><Affiliation>University of Chemistry and Technology Prague, Technická 5, 166 28, Praha 6, Czech Republic.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2017</Year>
<Month>11</Month>
<Day>10</Day>
</ArticleDate>
</Article>
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<MedlineTA>Microb Ecol</MedlineTA>
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<NameOfSubstance UI="D019755">Carbon-Carbon Lyases</NameOfSubstance>
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</MeshHeading>
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<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
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<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D001673" MajorTopicYN="N">Biodegradation, Environmental</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D044822" MajorTopicYN="N">Biodiversity</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018533" MajorTopicYN="N">Biomass</DescriptorName>
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<MeshHeading><DescriptorName UI="D018153" MajorTopicYN="N" Type="Geographic">Czech Republic</DescriptorName>
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<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
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<MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
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<MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
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<MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
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<MeshHeading><DescriptorName UI="D012988" MajorTopicYN="Y">Soil Microbiology</DescriptorName>
</MeshHeading>
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<KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Endophytes</Keyword>
<Keyword MajorTopicYN="N">PGPB</Keyword>
<Keyword MajorTopicYN="N">Phytoremediation</Keyword>
<Keyword MajorTopicYN="N">Poplar</Keyword>
<Keyword MajorTopicYN="N">Risk elements</Keyword>
<Keyword MajorTopicYN="N">Sordariomycetes</Keyword>
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Distinct Communities of Poplar Endophytes on an Unpolluted and a Risk Element-Polluted Site and Their Plant Growth-Promoting Potential In Vitro.

Distinct Communities of Poplar Endophytes on an Unpolluted and a Risk Element-Polluted Site and Their Plant Growth-Promoting Potential In Vitro.

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